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SynGap Missense Server

Table of SynGAP1 Isoform α2 (UniProt Q96PV0-1) Missense Variants.

c.dna Variant SGM Consensus Domain ClinVar gnomAD ESM1b AlphaMissense REVEL FoldX Rosetta Foldetta PremPS PROVEAN PolyPhen-2 HumDiv PolyPhen-2 HumVar FATHMM SIFT PAM Physical SASA Normalized B-factor backbone Normalized B-factor sidechain SynGAP Structural Annotation DOI
Clinical Status Review Subm. ID Allele count Allele freq. LLR score Prediction Pathogenicity Class Optimized Score Prediction Average ΔΔG Prediction StdDev ΔΔG Prediction ΔΔG Prediction ΔΔG Prediction Score Prediction pph2_prob Prediction pph2_prob Prediction Nervous System Score Prediction Prediction Status Conservation Sequences PAM250 PAM120 Hydropathy Δ MW Δ Average Δ Δ StdDev Δ StdDev Secondary Tertiary bonds Inside out GAP-Ras interface At membrane No effect MD Alert Verdict Description
c.1003C>TR335C
(3D Viewer)
Likely PathogenicC2Uncertain 16-33437908-C-T16.20e-7-14.354Likely Pathogenic0.938Likely PathogenicAmbiguous0.277Likely Benign0.53Ambiguous0.10.85Ambiguous0.69Ambiguous0.46Likely Benign-5.69Deleterious1.000Probably Damaging0.998Probably Damaging1.67Pathogenic0.01Affected3.3822-3-47.0-53.05
c.1040C>AT347N
(3D Viewer)
Likely BenignC2Uncertain 16-33437945-C-A95.58e-6-5.545Likely Benign0.165Likely BenignLikely Benign0.059Likely Benign0.41Likely Benign0.10.46Likely Benign0.44Likely Benign-0.06Likely Benign1.96Neutral0.001Benign0.001Benign1.67Pathogenic0.60Tolerated3.372500-2.813.00
c.1058T>CL353P
(3D Viewer)
Likely PathogenicC2Uncertain 1-7.913In-Between0.936Likely PathogenicAmbiguous0.464Likely Benign4.63Destabilizing0.110.19Destabilizing7.41Destabilizing2.17Destabilizing-3.70Deleterious0.947Possibly Damaging0.454Possibly Damaging1.29Pathogenic0.02Affected3.3725-3-3-5.4-16.04
c.1067G>AR356H
(3D Viewer)
Likely PathogenicC2Likely Benign 16-33437972-G-A95.66e-6-11.453Likely Pathogenic0.614Likely PathogenicLikely Benign0.314Likely Benign0.59Ambiguous0.1-0.27Likely Benign0.16Likely Benign1.17Destabilizing-4.43Deleterious0.999Probably Damaging0.987Probably Damaging1.70Pathogenic0.01Affected3.3922021.3-19.05
c.106C>TH36YLikely BenignUncertain 16-33423515-C-T21.24e-6-3.461Likely Benign0.139Likely BenignLikely Benign0.023Likely Benign-1.03Neutral0.219Benign0.066Benign4.16Benign0.00Affected4.321021.926.03
c.1082A>CQ361P
(3D Viewer)
Likely PathogenicC2Likely Pathogenic 1-13.280Likely Pathogenic0.956Likely PathogenicLikely Pathogenic0.482Likely Benign3.12Destabilizing0.03.45Destabilizing3.29Destabilizing0.38Likely Benign-3.03Deleterious0.996Probably Damaging0.979Probably Damaging1.63Pathogenic0.05Affected3.3725-101.9-31.01
c.1118G>AG373E
(3D Viewer)
C2Uncertain 1-7.281In-Between0.569Likely PathogenicLikely Benign0.420Likely Benign4.13Destabilizing3.20.52Ambiguous2.33Destabilizing-0.02Likely Benign-0.69Neutral0.001Benign0.000Benign3.90Benign0.01Affected0-2-3.172.06
c.1126G>TG376CC2Uncertain 1-7.686In-Between0.125Likely BenignLikely Benign0.560Likely Pathogenic2.56Destabilizing0.50.22Likely Benign1.39Ambiguous0.16Likely Benign-1.15Neutral1.000Probably Damaging1.000Probably Damaging1.32Pathogenic0.01Affected-3-32.946.09
c.1131G>AM377I
(3D Viewer)
Likely BenignC2Uncertain 16-33438036-G-A16.23e-7-2.895Likely Benign0.212Likely BenignLikely Benign0.227Likely Benign0.76Ambiguous0.30.54Ambiguous0.65Ambiguous0.24Likely Benign-0.41Neutral0.000Benign0.001Benign5.46Benign0.26Tolerated4.3212122.6-18.03
c.113C>TP38LLikely BenignConflicting 46-33423522-C-T84.96e-6-2.469Likely Benign0.197Likely BenignLikely Benign0.141Likely Benign-2.56Deleterious0.983Probably Damaging0.931Probably Damaging4.02Benign0.00Affected4.321-3-35.416.04
c.1147G>TG383W
(3D Viewer)
C2Uncertain 16-33438052-G-T16.22e-7-10.161Likely Pathogenic0.439AmbiguousLikely Benign0.469Likely Benign5.81Destabilizing3.64.44Destabilizing5.13Destabilizing0.08Likely Benign-1.01Neutral0.959Probably Damaging0.704Possibly Damaging4.09Benign0.00Affected4.327-2-7-0.5129.16
c.1157G>AG386E
(3D Viewer)
C2Uncertain 16-33438062-G-A-9.286Likely Pathogenic0.686Likely PathogenicLikely Benign0.447Likely Benign3.69Destabilizing2.90.79Ambiguous2.24Destabilizing0.54Ambiguous-0.83Neutral0.860Possibly Damaging0.354Benign3.93Benign0.01Affected4.323-20-3.172.06
c.1202G>AR401Q
(3D Viewer)
Likely PathogenicC2Uncertain 16-33438107-G-A-11.213Likely Pathogenic0.969Likely PathogenicLikely Pathogenic0.780Likely Pathogenic0.96Ambiguous0.11.50Ambiguous1.23Ambiguous1.20Destabilizing-3.69Deleterious0.999Probably Damaging0.978Probably Damaging5.47Benign0.04Affected3.3827111.0-28.06
c.1214G>CR405P
(3D Viewer)
Likely PathogenicC2Uncertain 1-14.206Likely Pathogenic0.999Likely PathogenicLikely Pathogenic0.572Likely Pathogenic3.11Destabilizing0.35.19Destabilizing4.15Destabilizing1.26Destabilizing-6.32Deleterious1.000Probably Damaging1.000Probably Damaging3.62Benign0.01Affected3.3828-202.9-59.07
c.121C>TR41CLikely BenignConflicting 36-33423530-C-T74.34e-6-4.745Likely Benign0.207Likely BenignLikely Benign0.093Likely Benign-1.10Neutral0.976Probably Damaging0.919Probably Damaging4.13Benign0.00Affected4.321-4-37.0-53.05
c.1221G>TQ407H
(3D Viewer)
Likely PathogenicC2Uncertain 1-10.526Likely Pathogenic0.830Likely PathogenicAmbiguous0.206Likely Benign0.59Ambiguous0.00.61Ambiguous0.60Ambiguous1.10Destabilizing-4.51Deleterious0.982Probably Damaging0.947Probably Damaging3.88Benign0.01Affected3.3828030.39.01
c.1222A>GT408AC2Uncertain 1-8.304Likely Pathogenic0.114Likely BenignLikely Benign0.118Likely Benign0.37Likely Benign0.6-0.06Likely Benign0.16Likely Benign0.72Ambiguous-3.07Deleterious0.540Possibly Damaging0.131Benign4.16Benign0.14Tolerated102.5-30.03
c.1240A>GM414VGAPUncertain 1-8.003Likely Pathogenic0.541AmbiguousLikely Benign0.261Likely Benign1.81Ambiguous0.41.73Ambiguous1.77Ambiguous0.95Ambiguous-2.95Deleterious0.999Probably Damaging0.987Probably Damaging3.43Benign0.24Tolerated212.3-32.06
c.127G>AG43SLikely BenignUncertain 26-33423536-G-A16.20e-7-3.301Likely Benign0.078Likely BenignLikely Benign0.057Likely Benign-0.30Neutral0.162Benign0.096Benign4.29Benign0.00Affected4.32110-0.430.03
c.1339G>CV447L
(3D Viewer)
Likely BenignGAPUncertain 1-5.136Likely Benign0.491AmbiguousLikely Benign0.180Likely Benign-1.13Ambiguous0.10.54Ambiguous-0.30Likely Benign0.03Likely Benign-0.29Neutral0.947Possibly Damaging0.851Possibly Damaging3.61Benign0.90Tolerated3.373212-0.414.03
c.1345A>GS449G
(3D Viewer)
Likely BenignGAPUncertain 16-33438250-A-G31.86e-6-5.936Likely Benign0.071Likely BenignLikely Benign0.116Likely Benign0.47Likely Benign0.00.55Ambiguous0.51Ambiguous0.85Ambiguous-2.32Neutral0.948Possibly Damaging0.124Benign3.35Benign0.13Tolerated3.3732010.4-30.03
c.1352T>CL451P
(3D Viewer)
Likely PathogenicGAPLikely Pathogenic 1-14.549Likely Pathogenic1.000Likely PathogenicLikely Pathogenic0.750Likely Pathogenic6.92Destabilizing0.28.57Destabilizing7.75Destabilizing2.58Destabilizing-6.81Deleterious1.000Probably Damaging1.000Probably Damaging2.43Pathogenic0.00Affected3.3734-3-3-5.4-16.04
c.1354G>AV452I
(3D Viewer)
GAPUncertain 1-8.985Likely Pathogenic0.361AmbiguousLikely Benign0.218Likely Benign-0.08Likely Benign0.10.51Ambiguous0.22Likely Benign0.25Likely Benign-0.99Neutral0.947Possibly Damaging0.851Possibly Damaging3.26Benign0.05Affected430.314.03
c.1367A>CQ456P
(3D Viewer)
Likely PathogenicGAPUncertain 1-15.250Likely Pathogenic0.993Likely PathogenicLikely Pathogenic0.469Likely Benign3.68Destabilizing0.28.43Destabilizing6.06Destabilizing0.82Ambiguous-5.66Deleterious1.000Probably Damaging0.999Probably Damaging3.34Benign0.07Tolerated3.3734-101.9-31.01
c.136C>TP46SLikely BenignUncertain 1-3.338Likely Benign0.302Likely BenignLikely Benign0.066Likely Benign-0.60Neutral0.909Possibly Damaging0.901Possibly Damaging4.15Benign0.00Affected1-10.8-10.04
c.1370G>AS457NLikely PathogenicGAPUncertain 1-10.221Likely Pathogenic0.949Likely PathogenicAmbiguous0.241Likely Benign0.19Likely Benign0.0-0.22Likely Benign-0.02Likely Benign0.67Ambiguous-2.76Deleterious0.940Possibly Damaging0.843Possibly Damaging3.28Benign0.06Tolerated11-2.727.03
c.13C>GR5GLikely BenignUncertain 1-3.639Likely Benign0.150Likely BenignLikely Benign0.169Likely Benign-0.16Neutral0.013Benign0.003Benign4.12Benign0.00Affected4.321-2-34.1-99.14
c.1402A>GM468V
(3D Viewer)
GAPUncertain 1-9.461Likely Pathogenic0.361AmbiguousLikely Benign0.570Likely Pathogenic2.69Destabilizing0.12.20Destabilizing2.45Destabilizing0.89Ambiguous-1.66Neutral0.998Probably Damaging0.993Probably Damaging-1.21Pathogenic0.08Tolerated3.3731122.3-32.06
c.1404G>AM468I
(3D Viewer)
Likely PathogenicGAPUncertain 16-33438436-G-A16.20e-7-8.583Likely Pathogenic0.907Likely PathogenicAmbiguous0.508Likely Pathogenic2.53Destabilizing0.21.89Ambiguous2.21Destabilizing0.37Likely Benign-1.06Neutral0.748Possibly Damaging0.886Possibly Damaging-1.10Pathogenic0.07Tolerated3.3731122.6-18.03
c.1405G>AA469T
(3D Viewer)
Likely PathogenicGAPUncertain 1-9.540Likely Pathogenic0.723Likely PathogenicLikely Benign0.527Likely Pathogenic2.26Destabilizing0.11.90Ambiguous2.08Destabilizing0.34Likely Benign-1.46Neutral0.994Probably Damaging0.986Probably Damaging-1.21Pathogenic0.42Tolerated10-2.530.03
c.1408A>GM470V
(3D Viewer)
Likely PathogenicGAPUncertain 1-8.856Likely Pathogenic0.478AmbiguousLikely Benign0.770Likely Pathogenic2.73Destabilizing0.11.88Ambiguous2.31Destabilizing1.31Destabilizing-3.58Deleterious0.999Probably Damaging0.993Probably Damaging-1.20Pathogenic0.15Tolerated3.3734122.3-32.06
c.140G>AR47QLikely BenignLikely Benign 16-33423549-G-A42.48e-6-4.989Likely Benign0.347AmbiguousLikely Benign0.096Likely Benign-0.57Neutral0.829Possibly Damaging0.614Possibly Damaging4.12Benign0.00Affected4.321111.0-28.0610.1016/j.ajhg.2020.11.011
c.1417G>AV473I
(3D Viewer)
GAPUncertain 16-33438449-G-A16.20e-7-7.481In-Between0.418AmbiguousLikely Benign0.203Likely Benign-0.12Likely Benign0.01.20Ambiguous0.54Ambiguous-0.06Likely Benign-0.91Neutral0.929Possibly Damaging0.917Probably Damaging3.74Benign0.18Tolerated3.3734340.314.03
c.1436G>AR479Q
(3D Viewer)
Likely BenignGAPUncertain 16-33438468-G-A74.34e-6-7.109In-Between0.259Likely BenignLikely Benign0.191Likely Benign0.54Ambiguous0.10.57Ambiguous0.56Ambiguous0.49Likely Benign-1.16Neutral1.000Probably Damaging0.991Probably Damaging3.42Benign0.31Tolerated3.3932111.0-28.06
c.1447A>GI483V
(3D Viewer)
GAPConflicting 2-10.121Likely Pathogenic0.523AmbiguousLikely Benign0.228Likely Benign1.00Ambiguous0.00.27Likely Benign0.64Ambiguous1.02Destabilizing-0.86Neutral0.914Possibly Damaging0.921Probably Damaging3.23Benign0.03Affected3.373234-0.3-14.03
c.1453C>AR485S
(3D Viewer)
Likely PathogenicGAPUncertain 1-15.603Likely Pathogenic0.998Likely PathogenicLikely Pathogenic0.609Likely Pathogenic0.40Likely Benign0.11.07Ambiguous0.74Ambiguous0.82Ambiguous-5.97Deleterious1.000Probably Damaging1.000Probably Damaging1.93Pathogenic0.00Affected0-13.7-69.11
c.1454G>AR485H
(3D Viewer)
Likely PathogenicGAPLikely Benign 16-33438486-G-A138.05e-6-13.628Likely Pathogenic0.948Likely PathogenicAmbiguous0.618Likely Pathogenic0.77Ambiguous0.10.12Likely Benign0.45Likely Benign1.13Destabilizing-4.97Deleterious1.000Probably Damaging0.998Probably Damaging1.93Pathogenic0.00Affected3.3735021.3-19.05
c.1463C>TT488M
(3D Viewer)
Likely PathogenicGAPUncertain 16-33438495-C-T21.24e-6-12.459Likely Pathogenic0.973Likely PathogenicLikely Pathogenic0.746Likely Pathogenic0.66Ambiguous0.31.62Ambiguous1.14Ambiguous0.46Likely Benign-5.70Deleterious1.000Probably Damaging0.999Probably Damaging3.21Benign0.00Affected3.3735-1-12.630.09
c.1468G>CA490P
(3D Viewer)
Likely PathogenicGAPUncertain 1-12.905Likely Pathogenic0.941Likely PathogenicAmbiguous0.878Likely Pathogenic-1.27Ambiguous0.11.31Ambiguous0.02Likely Benign1.07Destabilizing-4.81Deleterious1.000Probably Damaging0.998Probably Damaging-1.42Pathogenic0.01Affected3.3735-11-3.426.04
c.1474A>GK492E
(3D Viewer)
Likely PathogenicGAPConflicting 2-16.175Likely Pathogenic0.998Likely PathogenicLikely Pathogenic0.510Likely Pathogenic1.53Ambiguous0.11.90Ambiguous1.72Ambiguous1.42Destabilizing-3.98Deleterious1.000Probably Damaging0.998Probably Damaging2.99Benign0.01Affected3.3735100.40.94
c.1483G>AE495K
(3D Viewer)
Likely PathogenicGAPUncertain 1-11.478Likely Pathogenic0.986Likely PathogenicLikely Pathogenic0.869Likely Pathogenic0.15Likely Benign0.20.66Ambiguous0.41Likely Benign0.70Ambiguous-3.91Deleterious0.999Probably Damaging0.994Probably Damaging-1.29Pathogenic0.01Affected3.373510-0.4-0.94
c.1499T>CL500P
(3D Viewer)
Likely PathogenicGAPPathogenic 1-15.898Likely Pathogenic0.996Likely PathogenicLikely Pathogenic0.894Likely Pathogenic5.91Destabilizing0.38.90Destabilizing7.41Destabilizing1.92Destabilizing-6.96Deleterious1.000Probably Damaging1.000Probably Damaging-1.37Pathogenic0.01Affected3.3735-3-3-5.4-16.04
c.1511A>GK504R
(3D Viewer)
Likely BenignGAPUncertain16-33438543-A-G21.24e-6-4.365Likely Benign0.088Likely BenignLikely Benign0.238Likely Benign0.13Likely Benign0.10.51Ambiguous0.32Likely Benign0.94Ambiguous-2.16Neutral0.002Benign0.015Benign-1.41Pathogenic0.11Tolerated3.373523-0.628.01
c.1513T>CY505H
(3D Viewer)
Likely PathogenicGAPLikely Pathogenic 1-11.383Likely Pathogenic0.982Likely PathogenicLikely Pathogenic0.646Likely Pathogenic2.91Destabilizing0.12.88Destabilizing2.90Destabilizing1.60Destabilizing-4.97Deleterious1.000Probably Damaging1.000Probably Damaging2.64Benign0.00Affected3.373520-1.9-26.03
c.1513T>GY505D
(3D Viewer)
Likely PathogenicGAPLikely Pathogenic 1-14.078Likely Pathogenic0.993Likely PathogenicLikely Pathogenic0.718Likely Pathogenic4.98Destabilizing0.14.72Destabilizing4.85Destabilizing2.49Destabilizing-9.95Deleterious1.000Probably Damaging1.000Probably Damaging2.60Benign0.00Affected3.3735-3-4-2.2-48.09
c.1516C>TL506F
(3D Viewer)
Likely PathogenicGAPUncertain 1-11.262Likely Pathogenic0.883Likely PathogenicAmbiguous0.464Likely Benign4.92Destabilizing0.85.76Destabilizing5.34Destabilizing0.91Ambiguous-3.98Deleterious0.999Probably Damaging0.997Probably Damaging1.62Pathogenic0.01Affected3.373502-1.034.02
c.1540A>TI514F
(3D Viewer)
Likely PathogenicGAPUncertain 1-13.383Likely Pathogenic0.962Likely PathogenicLikely Pathogenic0.601Likely Pathogenic2.35Destabilizing0.33.74Destabilizing3.05Destabilizing0.93Ambiguous-3.98Deleterious0.997Probably Damaging0.993Probably Damaging2.89Benign0.00Affected3.373501-1.734.02
c.1552T>CY518H
(3D Viewer)
Likely PathogenicGAPUncertain 1-9.797Likely Pathogenic0.943Likely PathogenicAmbiguous0.496Likely Benign2.39Destabilizing0.40.82Ambiguous1.61Ambiguous1.31Destabilizing-4.74Deleterious1.000Probably Damaging1.000Probably Damaging3.40Benign0.08Tolerated02-1.9-26.03
c.1558T>CS520P
(3D Viewer)
Likely PathogenicGAPUncertain 1-12.707Likely Pathogenic0.999Likely PathogenicLikely Pathogenic0.855Likely Pathogenic3.72Destabilizing0.88.86Destabilizing6.29Destabilizing0.83Ambiguous-4.57Deleterious0.997Probably Damaging0.986Probably Damaging-1.32Pathogenic0.01Affected1-1-0.810.04
c.1559C>TS520F
(3D Viewer)
Likely PathogenicGAPUncertain 1-12.541Likely Pathogenic0.999Likely PathogenicLikely Pathogenic0.833Likely Pathogenic-1.20Ambiguous0.40.39Likely Benign-0.41Likely Benign0.25Likely Benign-5.57Deleterious0.999Probably Damaging0.996Probably Damaging-1.36Pathogenic0.00Affected3.3735-2-33.660.10
c.155C>TS52LUncertain 16-33423564-C-T16.20e-7-7.199In-Between0.688Likely PathogenicLikely Benign0.087Likely Benign-1.41Neutral0.829Possibly Damaging0.706Possibly Damaging4.10Benign0.00Affected4.321-3-24.626.08
c.1600T>CS534P
(3D Viewer)
Likely BenignGAPUncertain 16-33438843-T-C31.86e-6-5.056Likely Benign0.265Likely BenignLikely Benign0.203Likely Benign-0.40Likely Benign0.20.35Likely Benign-0.03Likely Benign0.47Likely Benign-3.81Deleterious0.993Probably Damaging0.993Probably Damaging3.32Benign0.05Affected3.3735-11-0.810.04
c.1631G>AR544Q
(3D Viewer)
Likely PathogenicGAPUncertain 16-33438874-G-A16.20e-7-10.281Likely Pathogenic0.596Likely PathogenicLikely Benign0.542Likely Pathogenic0.19Likely Benign0.20.87Ambiguous0.53Ambiguous1.40Destabilizing-2.41Neutral1.000Probably Damaging0.997Probably Damaging-1.40Pathogenic0.09Tolerated3.3735111.0-28.06
c.1635G>AM545I
(3D Viewer)
Likely PathogenicGAPUncertain 1-8.348Likely Pathogenic0.999Likely PathogenicLikely Pathogenic0.592Likely Pathogenic0.47Likely Benign0.10.14Likely Benign0.31Likely Benign0.63Ambiguous-3.61Deleterious0.935Possibly Damaging0.941Probably Damaging-1.27Pathogenic0.28Tolerated3.3735122.6-18.03
c.163C>AQ55KLikely BenignUncertain 26-33423572-C-A241.49e-5-5.840Likely Benign0.612Likely PathogenicLikely Benign0.085Likely Benign-1.21Neutral0.140Benign0.184Benign3.91Benign0.00Affected4.32111-0.40.04
c.1663G>AV555I
(3D Viewer)
Likely BenignGAPUncertain 1-4.544Likely Benign0.084Likely BenignLikely Benign0.253Likely Benign-0.82Ambiguous0.0-0.41Likely Benign-0.62Ambiguous-0.55Ambiguous0.45Neutral0.002Benign0.002Benign-1.26Pathogenic1.00Tolerated430.314.03
c.1667A>TN556I
(3D Viewer)
Likely PathogenicGAPLikely Benign 16-33438910-A-T-13.391Likely Pathogenic0.929Likely PathogenicAmbiguous0.761Likely Pathogenic0.64Ambiguous0.00.17Likely Benign0.41Likely Benign0.26Likely Benign-7.52Deleterious1.000Probably Damaging0.999Probably Damaging-1.35Pathogenic0.02Affected3.3735-3-28.0-0.94
c.1673A>GH558R
(3D Viewer)
Likely PathogenicGAPUncertain 1-14.445Likely Pathogenic0.554AmbiguousLikely Benign0.587Likely Pathogenic-1.14Ambiguous0.1-0.23Likely Benign-0.69Ambiguous1.03Destabilizing-4.94Deleterious0.677Possibly Damaging0.239Benign-1.24Pathogenic0.14Tolerated3.373502-1.319.05
c.169C>TL57FLikely BenignUncertain 2-5.096Likely Benign0.459AmbiguousLikely Benign0.051Likely Benign-0.78Neutral0.824Possibly Damaging0.879Possibly Damaging3.96Benign0.00Affected4.32120-1.034.02
c.1702G>TV568L
(3D Viewer)
Likely PathogenicGAPUncertain 1-9.503Likely Pathogenic0.921Likely PathogenicAmbiguous0.651Likely Pathogenic-0.30Likely Benign0.30.57Ambiguous0.14Likely Benign0.56Ambiguous-2.69Deleterious0.511Possibly Damaging0.147Benign-1.23Pathogenic0.04Affected3.373512-0.414.03
c.1726T>CC576R
(3D Viewer)
Likely PathogenicGAPConflicting 2-14.886Likely Pathogenic1.000Likely PathogenicLikely Pathogenic0.579Likely Pathogenic7.20Destabilizing1.04.09Destabilizing5.65Destabilizing1.64Destabilizing-10.88Deleterious0.999Probably Damaging0.996Probably Damaging3.38Benign0.00Affected3.3735-3-4-7.053.05
c.172A>GM58VLikely BenignUncertain 1-2.211Likely Benign0.688Likely PathogenicLikely Benign0.160Likely Benign-0.71Neutral0.006Benign0.091Benign4.19Benign0.00Affected4.321122.3-32.06
c.1763T>CL588P
(3D Viewer)
Likely PathogenicGAPUncertain 1-14.771Likely Pathogenic1.000Likely PathogenicLikely Pathogenic0.932Likely Pathogenic5.61Destabilizing0.512.91Destabilizing9.26Destabilizing2.33Destabilizing-6.97Deleterious1.000Probably Damaging1.000Probably Damaging-1.42Pathogenic0.00Affected3.3834-3-3-5.4-16.04
c.1778T>CL593P
(3D Viewer)
Likely PathogenicGAPUncertain 1-13.961Likely Pathogenic0.999Likely PathogenicLikely Pathogenic0.777Likely Pathogenic5.75Destabilizing0.910.77Destabilizing8.26Destabilizing2.43Destabilizing-6.77Deleterious1.000Probably Damaging1.000Probably Damaging2.77Benign0.00Affected-3-3-5.4-16.04
c.1784T>AL595Q
(3D Viewer)
Likely PathogenicGAPUncertain 1-15.101Likely Pathogenic0.984Likely PathogenicLikely Pathogenic0.733Likely Pathogenic0.79Ambiguous0.11.40Ambiguous1.10Ambiguous1.99Destabilizing-5.97Deleterious1.000Probably Damaging1.000Probably Damaging2.75Benign0.00Affected3.3735-2-2-7.314.97
c.1784T>CL595P
(3D Viewer)
Likely PathogenicGAPUncertain 1-11.856Likely Pathogenic0.999Likely PathogenicLikely Pathogenic0.747Likely Pathogenic2.09Destabilizing0.85.88Destabilizing3.99Destabilizing1.78Destabilizing-6.97Deleterious1.000Probably Damaging1.000Probably Damaging2.72Benign0.00Affected3.3735-3-3-5.4-16.04
c.1789T>CF597L
(3D Viewer)
Likely PathogenicGAPUncertain 1-10.173Likely Pathogenic0.998Likely PathogenicLikely Pathogenic0.929Likely Pathogenic0.74Ambiguous0.12.12Destabilizing1.43Ambiguous1.20Destabilizing-5.97Deleterious0.999Probably Damaging0.994Probably Damaging-2.06Pathogenic0.13Tolerated201.0-34.02
c.182A>CE61ALikely BenignUncertain 1-5.235Likely Benign0.453AmbiguousLikely Benign0.074Likely Benign-1.52Neutral0.458Possibly Damaging0.678Possibly Damaging4.12Benign0.00Affected0-15.3-58.04
c.1832T>CM611T
(3D Viewer)
Likely BenignGAPUncertain 16-33440884-T-C16.19e-7-5.696Likely Benign0.101Likely BenignLikely Benign0.240Likely Benign1.98Ambiguous0.20.94Ambiguous1.46Ambiguous0.87Ambiguous-2.40Neutral0.034Benign0.038Benign-1.19Pathogenic0.29Tolerated3.3735-1-1-2.6-30.09
c.1835A>CQ612P
(3D Viewer)
Likely PathogenicGAPUncertain 1-9.684Likely Pathogenic0.673Likely PathogenicLikely Benign0.671Likely Pathogenic-0.19Likely Benign0.33.06Destabilizing1.44Ambiguous0.56Ambiguous-5.84Deleterious1.000Probably Damaging1.000Probably Damaging-1.31Pathogenic0.19Tolerated0-11.9-31.01
c.1851G>TE617D
(3D Viewer)
Likely BenignGAPUncertain 1-1.349Likely Benign0.241Likely BenignLikely Benign0.322Likely Benign0.12Likely Benign0.10.80Ambiguous0.46Likely Benign0.07Likely Benign-0.01Neutral0.994Probably Damaging0.979Probably Damaging-1.35Pathogenic0.88Tolerated3.3735230.0-14.03
c.1855A>TT619S
(3D Viewer)
Likely PathogenicGAPUncertain 1-8.608Likely Pathogenic0.677Likely PathogenicLikely Benign0.602Likely Pathogenic1.09Ambiguous0.21.35Ambiguous1.22Ambiguous0.85Ambiguous-3.42Deleterious0.999Probably Damaging0.998Probably Damaging-1.30Pathogenic0.05Affected3.373511-0.1-14.03
c.1873C>GL625VLikely PathogenicGAPUncertain 1-11.319Likely Pathogenic0.833Likely PathogenicAmbiguous0.480Likely Benign1.80Ambiguous0.71.69Ambiguous1.75Ambiguous1.42Destabilizing-2.96Deleterious0.998Probably Damaging0.992Probably Damaging3.07Benign0.01Affected210.4-14.03
c.1877T>CI626TLikely PathogenicGAPUncertain 1-10.420Likely Pathogenic0.946Likely PathogenicAmbiguous0.640Likely Pathogenic2.94Destabilizing0.12.70Destabilizing2.82Destabilizing2.23Destabilizing-4.18Deleterious1.000Probably Damaging1.000Probably Damaging3.04Benign0.00Affected0-1-5.2-12.05
c.187G>AE63KLikely BenignUncertain 1-4.976Likely Benign0.894Likely PathogenicAmbiguous0.103Likely Benign-0.70Neutral0.458Possibly Damaging0.678Possibly Damaging3.98Benign0.00Affected4.32110-0.4-0.94
c.187G>CE63QLikely BenignUncertain 1-4.038Likely Benign0.687Likely PathogenicLikely Benign0.078Likely Benign-0.85Neutral0.659Possibly Damaging0.775Possibly Damaging3.90Benign0.00Affected4.321220.0-0.98
c.1913A>GK638R
(3D Viewer)
Likely BenignGAPUncertain 1-2.700Likely Benign0.110Likely BenignLikely Benign0.216Likely Benign0.09Likely Benign0.1-0.04Likely Benign0.03Likely Benign0.53Ambiguous-2.55Deleterious0.649Possibly Damaging0.240Benign3.41Benign0.13Tolerated3.373123-0.628.01
c.1918A>TT640S
(3D Viewer)
Likely BenignGAPBenign 16-33441177-A-T16.20e-7-2.371Likely Benign0.062Likely BenignLikely Benign0.088Likely Benign-0.78Ambiguous0.10.43Likely Benign-0.18Likely Benign-0.30Likely Benign0.92Neutral0.000Benign0.001Benign3.60Benign0.33Tolerated3.373011-0.1-14.03
c.1942T>CF648LLikely PathogenicGAPUncertain 1-9.296Likely Pathogenic0.999Likely PathogenicLikely Pathogenic0.468Likely Benign2.71Destabilizing0.82.08Destabilizing2.40Destabilizing1.04Destabilizing-5.98Deleterious0.999Probably Damaging0.976Probably Damaging3.45Benign0.08Tolerated201.0-34.02
c.194A>GH65RLikely BenignUncertain 16-33425802-A-G16.20e-7-1.980Likely Benign0.967Likely PathogenicLikely Pathogenic0.073Likely Benign-1.60Neutral0.462Possibly Damaging0.227Benign4.19Benign0.00Affected4.32120-1.319.05
c.1957C>GL653VLikely BenignGAPUncertain 1-7.050In-Between0.301Likely BenignLikely Benign0.146Likely Benign3.28Destabilizing0.32.18Destabilizing2.73Destabilizing1.32Destabilizing-2.25Neutral0.227Benign0.039Benign3.28Benign0.08Tolerated210.4-14.03
c.196C>GP66ALikely BenignUncertain 1-2.845Likely Benign0.891Likely PathogenicAmbiguous0.091Likely Benign-1.56Neutral0.805Possibly Damaging0.539Possibly Damaging4.04Benign0.00Affected4.3211-13.4-26.04
c.196C>TP66SLikely BenignBenign 16-33425804-C-T21.24e-6-2.760Likely Benign0.929Likely PathogenicAmbiguous0.081Likely Benign-1.69Neutral0.909Possibly Damaging0.641Possibly Damaging4.01Benign0.00Affected4.3211-10.8-10.04
c.1970G>TW657L
(3D Viewer)
Likely PathogenicGAPUncertain 1-14.411Likely Pathogenic0.960Likely PathogenicLikely Pathogenic0.213Likely Benign0.14Likely Benign0.10.73Ambiguous0.44Likely Benign0.87Ambiguous-10.86Deleterious0.277Benign0.078Benign3.52Benign0.14Tolerated3.3924-2-24.7-73.05
c.1971G>CW657CLikely PathogenicGAPUncertain 1-12.035Likely Pathogenic0.997Likely PathogenicLikely Pathogenic0.463Likely Benign2.74Destabilizing0.31.69Ambiguous2.22Destabilizing1.30Destabilizing-11.06Deleterious1.000Probably Damaging0.982Probably Damaging3.43Benign0.03Affected-8-23.4-83.07
c.2029A>TS677C
(3D Viewer)
Likely BenignGAPBenign 1-8.496Likely Pathogenic0.076Likely BenignLikely Benign0.153Likely Benign-0.51Ambiguous0.3-0.30Likely Benign-0.41Likely Benign0.15Likely Benign-2.41Neutral0.932Possibly Damaging0.222Benign3.25Benign0.04Affected3.4123-103.316.06
c.2050G>AD684N
(3D Viewer)
Likely PathogenicGAPUncertain 1-13.155Likely Pathogenic0.985Likely PathogenicLikely Pathogenic0.382Likely Benign1.47Ambiguous0.81.76Ambiguous1.62Ambiguous0.37Likely Benign-4.99Deleterious0.999Probably Damaging0.746Possibly Damaging3.39Benign0.01Affected210.0-0.98
c.2050G>CD684H
(3D Viewer)
Likely PathogenicGAPUncertain 1-14.194Likely Pathogenic0.998Likely PathogenicLikely Pathogenic0.613Likely Pathogenic3.36Destabilizing1.02.95Destabilizing3.16Destabilizing0.55Ambiguous-6.98Deleterious1.000Probably Damaging0.972Probably Damaging3.36Benign0.00Affected3.4217-110.322.05
c.2060G>AR687Q
(3D Viewer)
Likely PathogenicGAPLikely Benign 1-10.002Likely Pathogenic0.575Likely PathogenicLikely Benign0.401Likely Benign0.92Ambiguous0.1-0.37Likely Benign0.28Likely Benign1.55Destabilizing-3.37Deleterious1.000Probably Damaging0.844Possibly Damaging3.91Benign0.03Affected3.4217111.0-28.06
c.2075T>AL692Q
(3D Viewer)
Likely PathogenicGAPPathogenic 1-13.873Likely Pathogenic0.998Likely PathogenicLikely Pathogenic0.596Likely Pathogenic3.24Destabilizing0.13.27Destabilizing3.26Destabilizing2.76Destabilizing-5.98Deleterious1.000Probably Damaging0.998Probably Damaging3.06Benign0.00Affected3.4217-2-2-7.314.97
c.2086C>GL696V
(3D Viewer)
Likely PathogenicGAPUncertain 1-11.909Likely Pathogenic0.745Likely PathogenicLikely Benign0.351Likely Benign2.35Destabilizing0.11.85Ambiguous2.10Destabilizing1.46Destabilizing-2.79Deleterious0.992Probably Damaging0.970Probably Damaging3.16Benign0.00Affected3.4613120.4-14.03
c.2101C>TP701S
(3D Viewer)
Likely BenignGAPUncertain 16-33441360-C-T31.86e-6-4.375Likely Benign0.221Likely BenignLikely Benign0.132Likely Benign1.33Ambiguous0.00.12Likely Benign0.73Ambiguous-0.36Likely Benign0.78Neutral0.044Benign0.025Benign3.48Benign1.00Tolerated3.4710-110.8-10.0410.1016/j.ajhg.2020.11.011
c.2113A>CK705Q
(3D Viewer)
Likely BenignGAPUncertain 16-33441372-A-C16.20e-7-5.787Likely Benign0.436AmbiguousLikely Benign0.142Likely Benign-0.10Likely Benign0.00.33Likely Benign0.12Likely Benign-0.02Likely Benign-0.24Neutral0.997Probably Damaging0.969Probably Damaging3.42Benign0.78Tolerated3.4710110.4-0.04
c.2131C>GL711V
(3D Viewer)
Likely PathogenicGAPUncertain16-33441596-C-G16.20e-7-10.045Likely Pathogenic0.709Likely PathogenicLikely Benign0.170Likely Benign3.48Destabilizing0.12.22Destabilizing2.85Destabilizing1.40Destabilizing-2.59Deleterious0.992Probably Damaging0.970Probably Damaging3.34Benign0.00Affected3.509120.4-14.03
c.2158G>AD720N
(3D Viewer)
Likely PathogenicGAPLikely Benign 16-33441623-G-A53.10e-6-9.135Likely Pathogenic0.654Likely PathogenicLikely Benign0.289Likely Benign0.01Likely Benign0.0-0.20Likely Benign-0.10Likely Benign0.46Likely Benign-3.74Deleterious1.000Probably Damaging0.995Probably Damaging2.18Pathogenic0.01Affected3.509120.0-0.98
c.2186A>GN729S
(3D Viewer)
Likely BenignGAPUncertain 1-1.578Likely Benign0.066Likely BenignLikely Benign0.063Likely Benign0.14Likely Benign0.11.34Ambiguous0.74Ambiguous-0.36Likely Benign-0.42Neutral0.221Benign0.027Benign3.38Benign0.93Tolerated3.597112.7-27.03
c.218G>AR73KLikely BenignUncertain 16-33425826-G-A21.24e-6-4.033Likely Benign0.151Likely BenignLikely Benign0.077Likely Benign-0.46Neutral0.053Benign0.007Benign4.14Benign0.00Affected4.321230.6-28.01
c.2195G>AR732KLikely BenignConflicting 26-33441660-G-A42.48e-6-5.278Likely Benign0.240Likely BenignLikely Benign0.045Likely Benign-0.82Neutral0.973Probably Damaging0.943Probably Damaging2.69Benign0.21Tolerated3.597320.6-28.01
c.2195G>CR732TUncertain 1-8.545Likely Pathogenic0.434AmbiguousLikely Benign0.075Likely Benign-1.96Neutral0.999Probably Damaging0.892Possibly Damaging2.59Benign0.12Tolerated3.597-1-13.8-55.08
c.2200C>TP734SLikely BenignUncertain 26-33441665-C-T21.24e-6-4.291Likely Benign0.077Likely BenignLikely Benign0.030Likely Benign-2.44Neutral0.344Benign0.048Benign2.77Benign0.11Tolerated3.6461-10.8-10.0410.1016/j.ajhg.2020.11.011
c.2206C>TR736CConflicting 36-33441671-C-T84.96e-6-7.113In-Between0.120Likely BenignLikely Benign0.190Likely Benign-2.06Neutral0.999Probably Damaging0.825Possibly Damaging2.48Pathogenic0.00Affected4.073-4-37.0-53.05
c.2207G>AR736HLikely BenignUncertain 16-33441672-G-A63.72e-6-5.409Likely Benign0.067Likely BenignLikely Benign0.029Likely Benign-0.12Neutral0.004Benign0.001Benign2.50Benign0.00Affected4.073201.3-19.05
c.2210A>CQ737PLikely BenignUncertain 1-2.407Likely Benign0.054Likely BenignLikely Benign0.154Likely Benign-1.22Neutral0.005Benign0.013Benign2.78Benign0.04Affected4.073-101.9-31.01
c.2214T>GS738RLikely BenignBenign 16-33441679-T-G16.20e-7-4.241Likely Benign0.570Likely PathogenicLikely Benign0.068Likely Benign-1.55Neutral0.473Possibly Damaging0.193Benign2.69Benign0.01Affected4.3220-1-3.769.11
c.2215G>CE739QLikely BenignUncertain 1-2.846Likely Benign0.161Likely BenignLikely Benign0.071Likely Benign-1.06Neutral0.801Possibly Damaging0.339Benign2.57Benign0.00Affected4.322220.0-0.98
c.2216A>TE739VLikely BenignUncertain 1-3.136Likely Benign0.274Likely BenignLikely Benign0.085Likely Benign-1.86Neutral0.891Possibly Damaging0.575Possibly Damaging2.47Pathogenic0.00Affected4.322-2-27.7-29.98
c.2217G>CE739DLikely BenignUncertain 1-3.369Likely Benign0.062Likely BenignLikely Benign0.097Likely Benign-0.49Neutral0.002Benign0.005Benign2.59Benign0.00Affected320.0-14.03
c.2218C>TR740WUncertain 26-33441683-C-T63.72e-6-8.561Likely Pathogenic0.168Likely BenignLikely Benign0.180Likely Benign-3.09Deleterious1.000Probably Damaging0.938Probably Damaging2.52Benign0.01Affected4.3222-33.630.03
c.2219G>AR740QLikely BenignUncertain 16-33441684-G-A42.48e-6-5.195Likely Benign0.078Likely BenignLikely Benign0.102Likely Benign-0.67Neutral0.999Probably Damaging0.881Possibly Damaging2.60Benign0.08Tolerated4.322111.0-28.06
c.221G>AS74NLikely BenignUncertain 16-33425829-G-A53.10e-6-5.156Likely Benign0.112Likely BenignLikely Benign0.031Likely Benign-0.89Neutral0.043Benign0.007Benign4.09Benign0.00Affected4.32111-2.727.03
c.2221C>TP741SLikely BenignUncertain 26-33441686-C-T31.86e-6-3.700Likely Benign0.063Likely BenignLikely Benign0.076Likely Benign-0.27Neutral0.270Benign0.136Benign2.92Benign0.00Affected4.3221-10.8-10.0410.1016/j.ajhg.2020.11.011
c.2224C>TR742WLikely BenignUncertain 16-33441689-C-T63.72e-6-7.725In-Between0.133Likely BenignLikely Benign0.079Likely Benign-1.71Neutral0.992Probably Damaging0.684Possibly Damaging2.66Benign0.01Affected4.322-323.630.03
c.2225G>AR742QLikely BenignUncertain 26-33441690-G-A241.49e-5-4.090Likely Benign0.068Likely BenignLikely Benign0.054Likely Benign-0.19Neutral0.032Benign0.007Benign2.73Benign0.07Tolerated4.322111.0-28.06
c.2239G>CV747LLikely BenignUncertain 16-33441704-G-C21.24e-6-2.790Likely Benign0.096Likely BenignLikely Benign0.047Likely Benign-0.52Neutral0.065Benign0.033Benign2.67Benign0.00Affected4.32221-0.414.03
c.223G>AE75KLikely BenignBenign/Likely benign 2-4.020Likely Benign0.358AmbiguousLikely Benign0.134Likely Benign-1.12Neutral0.748Possibly Damaging0.017Benign4.07Benign0.00Affected01-0.4-0.94
c.2243T>GL748RLikely BenignConflicting 26-33441708-T-G31.86e-6-3.331Likely Benign0.245Likely BenignLikely Benign0.055Likely Benign-0.67Neutral0.912Possibly Damaging0.448Possibly Damaging2.73Benign0.02Affected4.322-3-2-8.343.03
c.2245C>TR749WLikely Benign 16-33441710-C-T31.86e-6-7.647In-Between0.338Likely BenignLikely Benign0.173Likely Benign-2.62Deleterious1.000Probably Damaging0.998Probably Damaging2.59Benign0.00Affected4.3222-33.630.03
c.2246G>AR749QLikely BenignLikely Benign 16-33441711-G-A42.48e-6-3.069Likely Benign0.212Likely BenignLikely Benign0.152Likely Benign-1.00Neutral0.999Probably Damaging0.994Probably Damaging2.64Benign0.03Affected4.322111.0-28.06
c.2249G>AG750EUncertain 1-2.618Likely Benign0.413AmbiguousLikely Benign0.146Likely Benign-2.27Neutral1.000Probably Damaging0.982Probably Damaging2.49Pathogenic0.01Affected3.9950-2-3.172.06
c.2255C>TS752LLikely BenignUncertain 26-33441720-C-T63.72e-6-3.386Likely Benign0.182Likely BenignLikely Benign0.195Likely Benign-2.09Neutral0.993Probably Damaging0.641Possibly Damaging1.51Pathogenic0.01Affected3.995-3-24.626.08
c.2270G>CG757ALikely BenignUncertain 1-2.626Likely Benign0.091Likely BenignLikely Benign0.066Likely Benign-0.45Neutral0.267Benign0.127Benign2.73Benign0.35Tolerated102.214.03
c.2275A>CM759LLikely BenignUncertain 16-33441740-A-C21.24e-6-2.431Likely Benign0.093Likely BenignLikely Benign0.048Likely Benign-0.53Neutral0.002Benign0.005Benign2.84Benign1.00Tolerated3.995421.9-18.03
c.2277G>AM759ILikely BenignUncertain 16-33441742-G-A16.20e-7-4.058Likely Benign0.393AmbiguousLikely Benign0.075Likely Benign-0.88Neutral0.454Possibly Damaging0.192Benign2.83Benign0.34Tolerated3.995122.6-18.03
c.227C>GS76CLikely BenignUncertain 16-33425835-C-G21.24e-6-5.408Likely Benign0.100Likely BenignLikely Benign0.076Likely Benign-1.78Neutral0.992Probably Damaging0.869Possibly Damaging3.71Benign0.00Affected4.3210-13.316.06
c.2282G>AR761QLikely BenignUncertain 16-33441747-G-A116.81e-6-4.187Likely Benign0.202Likely BenignLikely Benign0.191Likely Benign-0.63Neutral0.996Probably Damaging0.878Possibly Damaging2.75Benign0.40Tolerated3.995111.0-28.06
c.2282G>CR761PLikely BenignUncertain 26-33441747-G-C16.20e-7-5.091Likely Benign0.640Likely PathogenicLikely Benign0.201Likely Benign-1.89Neutral0.999Probably Damaging0.968Probably Damaging2.69Benign0.38Tolerated3.9950-22.9-59.07
c.2291A>GN764SLikely BenignBenign 1-3.149Likely Benign0.159Likely BenignLikely Benign0.058Likely Benign-0.84Neutral0.992Probably Damaging0.846Possibly Damaging2.65Benign0.61Tolerated3.646112.7-27.03
c.2294G>AS765NLikely BenignUncertain 1-5.098Likely Benign0.378AmbiguousLikely Benign0.094Likely Benign-0.94Neutral0.985Probably Damaging0.950Probably Damaging4.11Benign0.06Tolerated3.64611-2.727.03
c.2299A>GI767VLikely BenignUncertain 1-2.791Likely Benign0.064Likely BenignLikely Benign0.096Likely Benign0.10Neutral0.072Benign0.029Benign4.21Benign1.00Tolerated3.64643-0.3-14.03
c.2300T>CI767TLikely BenignUncertain 1-3.749Likely Benign0.252Likely BenignLikely Benign0.138Likely Benign-0.78Neutral0.625Possibly Damaging0.249Benign4.12Benign0.46Tolerated3.6460-1-5.2-12.05
c.2302G>AD768NLikely BenignUncertain 16-33442460-G-A22.57e-6-6.892Likely Benign0.453AmbiguousLikely Benign0.048Likely Benign-0.77Neutral0.106Benign0.009Benign4.07Benign0.96Tolerated3.646120.0-0.98
c.2302G>TD768YLikely PathogenicUncertain 16-33442460-G-T-9.866Likely Pathogenic0.824Likely PathogenicAmbiguous0.234Likely Benign-2.86Deleterious0.989Probably Damaging0.806Possibly Damaging4.01Benign0.07Tolerated3.646-4-32.248.09
c.2305C>TL769FLikely BenignUncertain 1-5.044Likely Benign0.146Likely BenignLikely Benign0.060Likely Benign-0.89Neutral0.925Possibly Damaging0.510Possibly Damaging3.94Benign0.02Affected20-1.034.02
c.2324G>AR775QLikely BenignConflicting 36-33442482-G-A111.41e-5-4.476Likely Benign0.229Likely BenignLikely Benign0.085Likely Benign-0.63Neutral0.969Probably Damaging0.863Possibly Damaging4.17Benign0.16Tolerated3.646111.0-28.0610.1016/j.ajhg.2020.11.011
c.2324G>CR775PLikely BenignBenign 1-5.072Likely Benign0.452AmbiguousLikely Benign0.168Likely Benign-0.79Neutral0.971Probably Damaging0.944Probably Damaging4.13Benign0.07Tolerated3.646-202.9-59.07
c.2339C>GS780CLikely BenignUncertain 46-33442891-C-G169.94e-6-7.603In-Between0.278Likely BenignLikely Benign0.078Likely Benign-1.41Neutral0.065Benign0.043Benign2.59Benign0.10Tolerated3.646-103.316.06
c.233G>TR78LLikely BenignUncertain 1-3.389Likely Benign0.635Likely PathogenicLikely Benign0.062Likely Benign-1.59Neutral0.385Benign0.021Benign3.84Benign0.00Affected-3-28.3-43.03
c.2343G>AM781ILikely BenignBenign 1-2.484Likely Benign0.323Likely BenignLikely Benign0.101Likely Benign0.05Neutral0.000Benign0.001Benign2.89Benign1.00Tolerated3.646122.6-18.03
c.2349G>AM783ILikely BenignBenign 16-33442901-G-A63.72e-6-3.560Likely Benign0.418AmbiguousLikely Benign0.042Likely Benign-0.54Neutral0.004Benign0.006Benign2.87Benign0.22Tolerated3.646122.6-18.03
c.2350G>AA784TLikely BenignBenign 1-3.579Likely Benign0.089Likely BenignLikely Benign0.046Likely Benign1.23Neutral0.001Benign0.006Benign2.92Benign1.00Tolerated3.64610-2.530.03
c.2353C>TR785CLikely PathogenicSH3-binding motifUncertain 16-33442905-C-T291.80e-5-5.887Likely Benign0.662Likely PathogenicLikely Benign0.126Likely Benign-5.06Deleterious0.144Benign0.046Benign2.22Pathogenic0.00Affected3.646-4-37.0-53.05
c.2354G>AR785HSH3-binding motifUncertain 26-33442906-G-A42.50e-6-4.782Likely Benign0.388AmbiguousLikely Benign0.129Likely Benign-2.61Deleterious0.999Probably Damaging0.947Probably Damaging2.25Pathogenic0.01Affected3.646201.3-19.05
c.2359C>AP787TLikely PathogenicSH3-binding motifLikely Benign 16-33442911-C-A171.05e-5-4.813Likely Benign0.603Likely PathogenicLikely Benign0.258Likely Benign-4.40Deleterious1.000Probably Damaging0.999Probably Damaging2.46Pathogenic0.01Affected3.6460-10.93.99
c.2359C>TP787SSH3-binding motifUncertain 16-33442911-C-T31.86e-6-4.203Likely Benign0.564AmbiguousLikely Benign0.221Likely Benign-3.81Deleterious1.000Probably Damaging0.999Probably Damaging2.48Pathogenic0.02Affected3.646-110.8-10.04
c.2362T>AS788TLikely BenignSH3-binding motifUncertain 26-33442914-T-A42.49e-6-4.288Likely Benign0.288Likely BenignLikely Benign0.092Likely Benign-2.25Neutral0.979Probably Damaging0.982Probably Damaging1.55Pathogenic0.02Affected3.646110.114.03
c.2369C>AT790NSH3-binding motifConflicting 36-33442921-C-A694.28e-5-5.243Likely Benign0.276Likely BenignLikely Benign0.103Likely Benign-2.54Deleterious0.999Probably Damaging0.997Probably Damaging2.27Pathogenic0.02Affected3.64600-2.813.00
c.2369C>GT790SLikely BenignSH3-binding motifUncertain 1-3.914Likely Benign0.123Likely BenignLikely Benign0.134Likely Benign-1.83Neutral0.997Probably Damaging0.989Probably Damaging2.39Pathogenic0.33Tolerated3.64611-0.1-14.03
c.2381C>TP794LLikely BenignSH3-binding motifBenign/Likely benign 26-33442933-C-T734.52e-5-3.808Likely Benign0.079Likely BenignLikely Benign0.075Likely Benign-0.80Neutral0.761Possibly Damaging0.321Benign4.24Benign0.03Affected4.073-3-35.416.04
c.2393C>TP798LLikely BenignSH3-binding motifUncertain 26-33442945-C-T63.72e-6-5.640Likely Benign0.074Likely BenignLikely Benign0.042Likely Benign-0.86Neutral0.981Probably Damaging0.631Possibly Damaging4.21Benign0.00Affected4.321-3-35.416.04
c.2401G>AG801SLikely BenignSH3-binding motifUncertain 1-3.665Likely Benign0.087Likely BenignLikely Benign0.039Likely Benign-0.41Neutral0.009Benign0.019Benign2.76Benign0.48Tolerated4.32201-0.430.03
c.2405G>AG802DLikely BenignSH3-binding motifUncertain 16-33442957-G-A16.20e-7-5.083Likely Benign0.476AmbiguousLikely Benign0.153Likely Benign-0.38Neutral0.126Benign0.138Benign2.72Benign0.09Tolerated3.7751-1-3.158.04
c.2408A>GK803RLikely BenignSH3-binding motifUncertain 1-2.281Likely Benign0.097Likely BenignLikely Benign0.018Likely Benign-1.52Neutral0.103Benign0.038Benign2.38Pathogenic0.00Affected3.77532-0.628.01
c.2414T>CL805PSH3-binding motifUncertain 1-4.661Likely Benign0.444AmbiguousLikely Benign0.272Likely Benign-3.40Deleterious0.975Probably Damaging0.767Possibly Damaging2.36Pathogenic0.00Affected3.775-3-3-5.4-16.04
c.2420A>GY807CSH3-binding motifUncertain 16-33442972-A-G16.20e-7-7.228In-Between0.204Likely BenignLikely Benign0.243Likely Benign-3.89Deleterious0.997Probably Damaging0.934Probably Damaging2.42Pathogenic0.01Affected3.7750-23.8-60.04
c.2420A>TY807FLikely BenignSH3-binding motifUncertain 1-3.667Likely Benign0.073Likely BenignLikely Benign0.057Likely Benign0.14Neutral0.012Benign0.022Benign2.92Benign0.98Tolerated3.775734.1-16.00
c.2434C>TP812SLikely BenignSH3-binding motifUncertain 16-33442986-C-T16.20e-7-5.689Likely Benign0.456AmbiguousLikely Benign0.162Likely Benign-0.62Neutral0.999Probably Damaging0.966Probably Damaging2.89Benign0.95Tolerated4.3241-10.8-10.04
c.2435C>AP812HSH3-binding motifUncertain 26-33442987-C-A31.86e-6-7.470In-Between0.698Likely PathogenicLikely Benign0.272Likely Benign-2.81Deleterious1.000Probably Damaging0.995Probably Damaging2.68Benign0.00Affected4.3240-2-1.640.02
c.2443C>AR815SSH3-binding motifBenign 1-7.324In-Between0.950Likely PathogenicAmbiguous0.138Likely Benign-1.86Neutral0.999Probably Damaging0.997Probably Damaging2.67Benign0.02Affected0-13.7-69.11
c.2443C>GR815GSH3-binding motifUncertain 1-7.983In-Between0.854Likely PathogenicAmbiguous0.146Likely Benign-3.22Deleterious0.999Probably Damaging0.997Probably Damaging2.62Benign0.02Affected4.324-3-24.1-99.14
c.2443C>TR815CLikely PathogenicSH3-binding motifUncertain 16-33442995-C-T53.10e-6-9.373Likely Pathogenic0.828Likely PathogenicAmbiguous0.174Likely Benign-3.89Deleterious1.000Probably Damaging0.998Probably Damaging2.59Benign0.00Affected4.324-4-37.0-53.05
c.2444G>AR815HSH3-binding motifLikely Benign 26-33442996-G-A241.49e-5-7.474In-Between0.553AmbiguousLikely Benign0.157Likely Benign-1.81Neutral1.000Probably Damaging0.998Probably Damaging2.61Benign0.02Affected4.324201.3-19.0510.1016/j.ajhg.2020.11.011
c.2444G>TR815LLikely PathogenicSH3-binding motifUncertain 1-8.546Likely Pathogenic0.865Likely PathogenicAmbiguous0.175Likely Benign-3.06Deleterious0.999Probably Damaging0.997Probably Damaging2.63Benign0.03Affected4.324-2-38.3-43.03
c.2458T>AY820NUncertain 1-9.032Likely Pathogenic0.842Likely PathogenicAmbiguous0.143Likely Benign-1.53Neutral0.999Probably Damaging0.977Probably Damaging2.74Benign0.20Tolerated-2-2-2.2-49.07
c.2459A>GY820CLikely PathogenicUncertain 1-8.797Likely Pathogenic0.744Likely PathogenicLikely Benign0.113Likely Benign-3.16Deleterious1.000Probably Damaging0.983Probably Damaging2.68Benign0.06Tolerated3.7750-23.8-60.04
c.2485G>AE829KLikely PathogenicPathogenic 1-7.527In-Between0.807Likely PathogenicAmbiguous0.194Likely Benign-2.65Deleterious0.994Probably Damaging0.900Possibly Damaging2.27Pathogenic0.00Affected3.77501-0.4-0.94
c.2493G>CE831DLikely BenignUncertain 16-33443045-G-C16.19e-7-3.055Likely Benign0.063Likely BenignLikely Benign0.073Likely Benign1.23Neutral0.002Benign0.002Benign2.64Benign0.77Tolerated3.775320.0-14.03
c.249A>TR83SLikely BenignUncertain 1-2.550Likely Benign0.999Likely PathogenicLikely Pathogenic0.094Likely Benign-1.87Neutral0.909Possibly Damaging0.587Possibly Damaging3.19Benign0.00Affected4.3210-13.7-69.11
c.2502G>CM834ILikely BenignUncertain 1-3.377Likely Benign0.291Likely BenignLikely Benign0.055Likely Benign-1.21Neutral0.026Benign0.009Benign2.56Benign0.00Affected4.324122.6-18.03
c.2503C>AL835MLikely BenignBenign 1-4.153Likely Benign0.121Likely BenignLikely Benign0.068Likely Benign-0.45Neutral0.999Probably Damaging0.977Probably Damaging2.67Benign0.12Tolerated3.77524-1.918.03
c.2506A>GS836GLikely BenignUncertain 16-33443058-A-G42.48e-6-4.749Likely Benign0.112Likely BenignLikely Benign0.066Likely Benign-1.65Neutral0.006Benign0.019Benign2.54Benign0.39Tolerated3.775100.4-30.03
c.250C>GR84GUncertain 1-6.627Likely Benign0.989Likely PathogenicLikely Pathogenic0.139Likely Benign-2.64Deleterious0.962Probably Damaging0.726Possibly Damaging3.68Benign0.00Affected4.321-3-24.1-99.14
c.2514C>AN838KLikely PathogenicUncertain 2-8.470Likely Pathogenic0.862Likely PathogenicAmbiguous0.097Likely Benign-2.78Deleterious0.997Probably Damaging0.995Probably Damaging2.69Benign0.16Tolerated3.77510-0.414.07
c.2518A>TS840CLikely PathogenicUncertain 1-8.799Likely Pathogenic0.904Likely PathogenicAmbiguous0.376Likely Benign-3.96Deleterious0.999Probably Damaging0.975Probably Damaging1.50Pathogenic0.00Affected3.7750-13.316.06
c.2521G>AV841MUncertain 16-33443073-G-A31.86e-6-7.000In-Between0.651Likely PathogenicLikely Benign0.119Likely Benign-0.74Neutral0.999Probably Damaging0.998Probably Damaging2.54Benign0.02Affected3.77512-2.332.06
c.2522T>CV841AUncertain 16-33443074-T-C31.86e-6-8.152Likely Pathogenic0.901Likely PathogenicAmbiguous0.183Likely Benign-2.13Neutral0.992Probably Damaging0.989Probably Damaging2.57Benign0.02Affected3.77500-2.4-28.05
c.2525C>AS842YLikely PathogenicLikely Pathogenic 1-16.124Likely Pathogenic0.995Likely PathogenicLikely Pathogenic0.191Likely Benign-4.28Deleterious0.944Possibly Damaging0.676Possibly Damaging1.97Pathogenic0.00Affected3.775-3-2-0.576.10
c.2548G>AG850RLikely BenignUncertain 1-5.082Likely Benign0.398AmbiguousLikely Benign0.194Likely Benign-0.07Neutral0.010Benign0.010Benign4.30Benign0.01Affected3.775-3-2-4.199.14
c.2557G>CG853RLikely BenignUncertain 1-4.749Likely Benign0.366AmbiguousLikely Benign0.091Likely Benign-1.27Neutral0.846Possibly Damaging0.624Possibly Damaging4.18Benign0.00Affected-3-2-4.199.14
c.2560C>TR854CLikely BenignUncertain 16-33443112-C-T31.86e-6-5.082Likely Benign0.170Likely BenignLikely Benign0.174Likely Benign-2.48Neutral1.000Probably Damaging0.947Probably Damaging4.05Benign0.01Affected3.883-3-47.0-53.05
c.2561G>AR854HLikely BenignUncertain 16-33443113-G-A42.48e-6-3.686Likely Benign0.094Likely BenignLikely Benign0.183Likely Benign-1.38Neutral0.997Probably Damaging0.899Possibly Damaging4.07Benign0.04Affected3.883201.3-19.05
c.2567A>GN856SLikely BenignUncertain 16-33443119-A-G21.24e-6-2.104Likely Benign0.064Likely BenignLikely Benign0.040Likely Benign-1.54Neutral0.901Possibly Damaging0.535Possibly Damaging4.16Benign0.30Tolerated3.883112.7-27.03
c.256G>AV86ILikely BenignUncertain 1-4.726Likely Benign0.338Likely BenignLikely Benign0.076Likely Benign-0.31Neutral0.267Benign0.097Benign3.94Benign0.00Affected4.321430.314.03
c.2573G>AS858NLikely BenignUncertain 16-33443125-G-A21.24e-6-4.311Likely Benign0.121Likely BenignLikely Benign0.107Likely Benign-0.67Neutral0.448Benign0.846Possibly Damaging4.13Benign0.02Affected3.77511-2.727.03
c.2578G>AV860ILikely BenignBenign 16-33443130-G-A211.30e-5-4.516Likely Benign0.095Likely BenignLikely Benign0.039Likely Benign-0.42Neutral0.009Benign0.006Benign4.24Benign0.00Affected3.775430.314.03
c.2582C>TS861LLikely BenignUncertain 16-33443134-C-T21.24e-6-4.966Likely Benign0.219Likely BenignLikely Benign0.144Likely Benign-2.10Neutral0.904Possibly Damaging0.355Benign3.93Benign0.07Tolerated4.323-3-24.626.08
c.2591C>TA864VLikely BenignUncertain 26-33443143-C-T63.72e-6-4.749Likely Benign0.126Likely BenignLikely Benign0.038Likely Benign-1.35Neutral0.767Possibly Damaging0.119Benign2.45Pathogenic0.30Tolerated3.824002.428.05
c.2596G>AV866ILikely BenignConflicting 36-33443148-G-A53.10e-6-4.652Likely Benign0.118Likely BenignLikely Benign0.059Likely Benign-0.39Neutral0.957Probably Damaging0.541Possibly Damaging2.69Benign0.27Tolerated3.824430.314.03
c.2596G>TV866LLikely BenignUncertain 16-33443148-G-T16.20e-7-3.352Likely Benign0.148Likely BenignLikely Benign0.046Likely Benign-0.97Neutral0.217Benign0.229Benign2.71Benign0.21Tolerated3.82421-0.414.03
c.2608C>GL870VLikely BenignUncertain 1-4.123Likely Benign0.300Likely BenignLikely Benign0.111Likely Benign-1.19Neutral0.997Probably Damaging0.992Probably Damaging2.64Benign0.12Tolerated3.883210.4-14.03
c.2619C>GS873RUncertain 16-33443171-C-G16.20e-7-5.856Likely Benign0.976Likely PathogenicLikely Pathogenic0.192Likely Benign-2.74Deleterious0.997Probably Damaging0.995Probably Damaging2.67Benign0.06Tolerated3.7750-1-3.769.11
c.2623G>AA875TLikely BenignUncertain 16-33443175-G-A16.20e-7-3.793Likely Benign0.179Likely BenignLikely Benign0.110Likely Benign-1.56Neutral0.972Probably Damaging0.864Possibly Damaging2.72Benign0.26Tolerated3.77501-2.530.03
c.2627C>TS876LUncertain 2-5.856Likely Benign0.489AmbiguousLikely Benign0.249Likely Benign-3.56Deleterious0.998Probably Damaging0.992Probably Damaging2.57Benign0.05Affected3.775-2-34.626.08
c.2632A>GT878ALikely BenignUncertain 1-2.154Likely Benign0.081Likely BenignLikely Benign0.088Likely Benign-0.67Neutral0.003Benign0.006Benign2.73Benign0.18Tolerated3.775102.5-30.03
c.2635_2636delinsAAA879KLikely BenignLikely Benign 1-5.877Likely Benign0.757Likely PathogenicLikely Benign-0.71Neutral0.969Probably Damaging0.593Possibly Damaging2.69Benign0.21Tolerated3.775-1-1-5.757.10
c.263T>CV88ALikely BenignUncertain 1-5.860Likely Benign0.993Likely PathogenicLikely Pathogenic0.050Likely Benign-1.22Neutral0.053Benign0.008Benign3.75Benign0.00Affected4.32100-2.4-28.05
c.2650C>TR884WLikely BenignUncertain 16-33443202-C-T53.10e-6-3.785Likely Benign0.332Likely BenignLikely Benign0.151Likely Benign0.26Neutral0.995Probably Damaging0.812Possibly Damaging2.56Benign0.05Affected4.324-323.630.03
c.2651G>AR884QLikely BenignUncertain 26-33443203-G-A53.10e-6-3.785Likely Benign0.128Likely BenignLikely Benign0.055Likely Benign-0.42Neutral0.012Benign0.004Benign2.62Benign0.36Tolerated4.324111.0-28.06
c.2657C>TA886VLikely BenignUncertain 16-33443209-C-T181.12e-5-4.478Likely Benign0.078Likely BenignLikely Benign0.061Likely Benign-0.20Neutral0.888Possibly Damaging0.314Benign2.17Pathogenic0.00Affected4.324002.428.05
c.265C>GP89ALikely BenignUncertain 2-5.778Likely Benign0.920Likely PathogenicAmbiguous0.095Likely Benign-2.47Neutral0.225Benign0.020Benign3.77Benign0.00Affected4.3211-13.4-26.04
c.2668C>TR890CBenign 16-33443220-C-T95.58e-6-5.786Likely Benign0.402AmbiguousLikely Benign0.200Likely Benign-3.38Deleterious1.000Probably Damaging0.971Probably Damaging3.94Benign0.04Affected4.324-4-37.0-53.05

Found 742 rows. Page 1/4 |